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About this paper

Berkay Günes, Leif Seute, Jigyasa Nigam, Frauke Gräter

Grappa-fullFF learns bonded and nonbonded parameters together for molecular mechanics, using quantum-mechanical energies and forces with electrostatic-potential and volume-based regularization. In 500 ns of explicit-solvent simulation of one capped alanine dipeptide in TIP3P water, its backbone-angle distribution had a Jensen–Shannon divergence of 0.0820 nats from the AMBER99SB-ILDN reference, versus 0.1596 for espaloma-0.3.2; this comparison does not establish broader transferability.

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